Carnation DB

Dca44556.1

Annotation

18-exons
f-1
sp|F6H8I2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g00190#unknown#0F0P0C
Os04t0177600-02 Actin/actin-like family protein.
Repeat List (scaffold5131)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44556.1	1	550	550	64.54	550	58	0
Target_name	Start	End	Length	Cov(%)
sp\|F6H8I2_VITVI	2	595	595	99.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44556.1	1	550	550	57.45	550	52	2e-168
Target_name	Start	End	Length	Cov(%)
Os04t0177600-02	2	586	587	99.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5131	Augustus	mRNA	26968	34743	.	+	.	ID=Dca44556.1;Parent=Dca44556
scaffold5131	Augustus	exon	26968	27040	.	+	.	ID=Dca44556.1.exon1;Parent=Dca44556.1
scaffold5131	Augustus	exon	29011	29129	.	+	.	ID=Dca44556.1.exon2;Parent=Dca44556.1
scaffold5131	Augustus	exon	29254	29313	.	+	.	ID=Dca44556.1.exon3;Parent=Dca44556.1
scaffold5131	Augustus	exon	30016	30118	.	+	.	ID=Dca44556.1.exon4;Parent=Dca44556.1
scaffold5131	Augustus	exon	30307	30383	.	+	.	ID=Dca44556.1.exon5;Parent=Dca44556.1
scaffold5131	Augustus	exon	31122	31311	.	+	.	ID=Dca44556.1.exon6;Parent=Dca44556.1
scaffold5131	Augustus	exon	31593	31657	.	+	.	ID=Dca44556.1.exon7;Parent=Dca44556.1
scaffold5131	Augustus	exon	32318	32407	.	+	.	ID=Dca44556.1.exon8;Parent=Dca44556.1
scaffold5131	Augustus	exon	32672	32722	.	+	.	ID=Dca44556.1.exon9;Parent=Dca44556.1
scaffold5131	Augustus	exon	32818	32949	.	+	.	ID=Dca44556.1.exon10;Parent=Dca44556.1
scaffold5131	Augustus	exon	33096	33185	.	+	.	ID=Dca44556.1.exon11;Parent=Dca44556.1
scaffold5131	Augustus	exon	33340	33410	.	+	.	ID=Dca44556.1.exon12;Parent=Dca44556.1
scaffold5131	Augustus	exon	33533	33729	.	+	.	ID=Dca44556.1.exon13;Parent=Dca44556.1
scaffold5131	Augustus	exon	33822	33865	.	+	.	ID=Dca44556.1.exon14;Parent=Dca44556.1
scaffold5131	Augustus	exon	33945	33994	.	+	.	ID=Dca44556.1.exon15;Parent=Dca44556.1
scaffold5131	Augustus	exon	34087	34132	.	+	.	ID=Dca44556.1.exon16;Parent=Dca44556.1
scaffold5131	Augustus	exon	34430	34480	.	+	.	ID=Dca44556.1.exon17;Parent=Dca44556.1
scaffold5131	Augustus	exon	34600	34743	.	+	.	ID=Dca44556.1.exon18;Parent=Dca44556.1