Carnation DB

Dca44557.1

Annotation

6-exons
f-1
sp|D7MH14_ARALL#ATBS14B#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_915419#unknown#0F0P0C
Repeat List (scaffold5131)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44557.1	1	127	128	60.93	127	60	4e-39
Target_name	Start	End	Length	Cov(%)
sp\|D7MH14_ARALL	2	129	131	97.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44557.1	1	127	128	60.93	127	60	3e-40
Target_name	Start	End	Length	Cov(%)
AT4G14455.1	1	128	130	98.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5131	Augus-PASA	mRNA	39320	41674	.	+	.	ID=Dca44557.1;Parent=Dca44557
scaffold5131	Augus-PASA	exon	39320	39333	.	+	.	ID=Dca44557.1.exon1;Parent=Dca44557.1
scaffold5131	Augus-PASA	exon	40341	40488	.	+	.	ID=Dca44557.1.exon2;Parent=Dca44557.1
scaffold5131	Augus-PASA	exon	40640	40696	.	+	.	ID=Dca44557.1.exon3;Parent=Dca44557.1
scaffold5131	Augus-PASA	exon	40786	40845	.	+	.	ID=Dca44557.1.exon4;Parent=Dca44557.1
scaffold5131	Augus-PASA	exon	40938	41023	.	+	.	ID=Dca44557.1.exon5;Parent=Dca44557.1
scaffold5131	Augus-PASA	exon	41653	41674	.	+	.	ID=Dca44557.1.exon6;Parent=Dca44557.1