Carnation DB

Dca44570.1

Annotation

12-exons
f-1
sp|D7MTK8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_331733#GO:0005737;GO:0043715;GO:0043716;GO:0043874;GO:0000287;GO:0008967;GO:0019509#5F1P1C
Os11t0484000-01 Class II aldolase/adducin, N-terminal family protein.
Repeat List (scaffold5135)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44570.1	9	513	513	73.87	505	75	0
Target_name	Start	End	Length	Cov(%)
sp\|D7MTK8_ARALL	13	519	519	97.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44570.1	6	513	513	71.73	508	73	0
Target_name	Start	End	Length	Cov(%)
Os11t0484000-01	15	518	519	97.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5135	Augus-PASA	mRNA	14964	22154	.	-	.	ID=Dca44570.1;Parent=Dca44570
scaffold5135	Augus-PASA	exon	14964	15055	.	-	.	ID=Dca44570.1.exon1;Parent=Dca44570.1
scaffold5135	Augus-PASA	exon	15160	15278	.	-	.	ID=Dca44570.1.exon2;Parent=Dca44570.1
scaffold5135	Augus-PASA	exon	15589	15698	.	-	.	ID=Dca44570.1.exon3;Parent=Dca44570.1
scaffold5135	Augus-PASA	exon	15838	15939	.	-	.	ID=Dca44570.1.exon4;Parent=Dca44570.1
scaffold5135	Augus-PASA	exon	16023	16172	.	-	.	ID=Dca44570.1.exon5;Parent=Dca44570.1
scaffold5135	Augus-PASA	exon	17668	17823	.	-	.	ID=Dca44570.1.exon6;Parent=Dca44570.1
scaffold5135	Augus-PASA	exon	17984	18157	.	-	.	ID=Dca44570.1.exon7;Parent=Dca44570.1
scaffold5135	Augustus	exon	18543	18632	.	-	.	ID=Dca44570.1.exon8;Parent=Dca44570.1
scaffold5135	Augustus	exon	18920	19039	.	-	.	ID=Dca44570.1.exon9;Parent=Dca44570.1
scaffold5135	Augustus	exon	20191	20286	.	-	.	ID=Dca44570.1.exon10;Parent=Dca44570.1
scaffold5135	Augustus	exon	20684	20820	.	-	.	ID=Dca44570.1.exon11;Parent=Dca44570.1
scaffold5135	Augustus	exon	21959	22154	.	-	.	ID=Dca44570.1.exon12;Parent=Dca44570.1