Dca44582.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold5139)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44582.1 |
10 |
637 |
651 |
42.54 |
628 |
41 |
4e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
15 |
681 |
1717 |
38.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44582.1 |
458 |
550 |
651 |
4.76 |
93 |
34 |
1e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5139 |
Augustus |
mRNA |
37635 |
39679 |
. |
+ |
. |
ID=Dca44582.1;Parent=Dca44582 |
| scaffold5139 |
Augustus |
exon |
37635 |
38074 |
. |
+ |
. |
ID=Dca44582.1.exon1;Parent=Dca44582.1 |
| scaffold5139 |
Augustus |
exon |
38164 |
39679 |
. |
+ |
. |
ID=Dca44582.1.exon2;Parent=Dca44582.1 |
