Dca44608.1
Annotation
- 3-exons
- f-1
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold5144)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44608.1 |
70 |
203 |
479 |
14.61 |
134 |
53 |
4e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
3 |
136 |
275 |
48.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5144 |
Augustus |
mRNA |
2623 |
5899 |
. |
- |
. |
ID=Dca44608.1;Parent=Dca44608 |
| scaffold5144 |
Augustus |
exon |
2623 |
2817 |
. |
- |
. |
ID=Dca44608.1.exon1;Parent=Dca44608.1 |
| scaffold5144 |
Augustus |
exon |
4505 |
4968 |
. |
- |
. |
ID=Dca44608.1.exon2;Parent=Dca44608.1 |
| scaffold5144 |
Augustus |
exon |
5119 |
5899 |
. |
- |
. |
ID=Dca44608.1.exon3;Parent=Dca44608.1 |
