Carnation DB

Dca44666.1

Annotation

5-exons
f-1
sp|B9HPB5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_650211#unknown#0F0P0C
Repeat List (scaffold5156)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44666.1	15	140	140	53.57	126	51	6e-28
Target_name	Start	End	Length	Cov(%)
sp\|B9HPB5_POPTR	17	162	162	90.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44666.1	18	140	140	40	123	42	2e-16
Target_name	Start	End	Length	Cov(%)
AT5G02020.1	22	149	149	85.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5156	Augustus	mRNA	18736	19922	.	+	.	ID=Dca44666.1;Parent=Dca44666
scaffold5156	Augustus	exon	18736	18843	.	+	.	ID=Dca44666.1.exon1;Parent=Dca44666.1
scaffold5156	Augustus	exon	19049	19142	.	+	.	ID=Dca44666.1.exon2;Parent=Dca44666.1
scaffold5156	Augustus	exon	19468	19610	.	+	.	ID=Dca44666.1.exon3;Parent=Dca44666.1
scaffold5156	Augustus	exon	19734	19794	.	+	.	ID=Dca44666.1.exon4;Parent=Dca44666.1
scaffold5156	Augustus	exon	19906	19922	.	+	.	ID=Dca44666.1.exon5;Parent=Dca44666.1