Carnation DB

Dca44672.1

Annotation

5-exons
f-112
sp|Q0WPN1_ARATH#Putative reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At1g10160#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold5158)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44672.1	199	508	508	23.22	310	31	1e-31
Target_name	Start	End	Length	Cov(%)
sp\|Q0WPN1_ARATH	100	490	910	42.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44672.1	265	508	508	17.12	244	31	7e-32
Target_name	Start	End	Length	Cov(%)
AT1G43760.1	302	574	626	43.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5158	Augustus	mRNA	18760	20909	.	-	.	ID=Dca44672.1;Parent=Dca44672
scaffold5158	Augustus	exon	18760	19031	.	-	.	ID=Dca44672.1.exon1;Parent=Dca44672.1
scaffold5158	Augustus	exon	19110	19571	.	-	.	ID=Dca44672.1.exon2;Parent=Dca44672.1
scaffold5158	Augustus	exon	19710	19961	.	-	.	ID=Dca44672.1.exon3;Parent=Dca44672.1
scaffold5158	Augustus	exon	20239	20403	.	-	.	ID=Dca44672.1.exon4;Parent=Dca44672.1
scaffold5158	Augustus	exon	20534	20909	.	-	.	ID=Dca44672.1.exon5;Parent=Dca44672.1