Carnation DB

Dca44719.1

Annotation

5-exons
f-1
sp|B9GV28_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_848772#GO:0031072;GO:0051082;GO:0006457#2F1P0C
Os02t0760000-00 Similar to chaperone protein dnaJ.
Repeat List (scaffold517)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44719.1	27	136	137	65.69	110	82	1e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9GV28_POPTR	30	140	141	78.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44719.1	23	137	137	57.66	115	69	4e-47
Target_name	Start	End	Length	Cov(%)
Os02t0760000-00	122	237	238	48.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold517	Augus-PASA	mRNA	52139	54162	.	-	.	ID=Dca44719.1;Parent=Dca44719
scaffold517	Augus-PASA	exon	52139	52210	.	-	.	ID=Dca44719.1.exon1;Parent=Dca44719.1
scaffold517	Augus-PASA	exon	52316	52386	.	-	.	ID=Dca44719.1.exon2;Parent=Dca44719.1
scaffold517	Augus-PASA	exon	53090	53165	.	-	.	ID=Dca44719.1.exon3;Parent=Dca44719.1
scaffold517	Augus-PASA	exon	53847	53924	.	-	.	ID=Dca44719.1.exon4;Parent=Dca44719.1
scaffold517	Augus-PASA	exon	54046	54162	.	-	.	ID=Dca44719.1.exon5;Parent=Dca44719.1