Carnation DB

Dca44720.1

Annotation

6-exons
f-1
sp|B9GN24_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830246#unknown#0F0P0C
Repeat List (scaffold517)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44720.1	8	240	240	56.25	233	58	3e-70
Target_name	Start	End	Length	Cov(%)
sp\|B9GN24_POPTR	24	249	249	90.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44720.1	5	240	240	50.41	236	52	3e-65
Target_name	Start	End	Length	Cov(%)
AT5G49710.3	10	235	235	96.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold517	Augus-PASA	mRNA	55462	57622	.	-	.	ID=Dca44720.1;Parent=Dca44720
scaffold517	Augus-PASA	exon	55462	55543	.	-	.	ID=Dca44720.1.exon1;Parent=Dca44720.1
scaffold517	Augus-PASA	exon	55728	55836	.	-	.	ID=Dca44720.1.exon2;Parent=Dca44720.1
scaffold517	Augus-PASA	exon	55938	55965	.	-	.	ID=Dca44720.1.exon3;Parent=Dca44720.1
scaffold517	Augus-PASA	exon	56428	56588	.	-	.	ID=Dca44720.1.exon4;Parent=Dca44720.1
scaffold517	Augus-PASA	exon	56770	56860	.	-	.	ID=Dca44720.1.exon5;Parent=Dca44720.1
scaffold517	Augus-PASA	exon	57371	57622	.	-	.	ID=Dca44720.1.exon6;Parent=Dca44720.1