Carnation DB

Dca44724.1

Annotation

13-exons
f-1
sp|B9GN34_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_816388#GO:0030131;GO:0006886;GO:0016192#0F2P1C
AT4G24550.2 | Symbols: | Clathrin adaptor complexes medium subunit family protein | chr4:12675873-12678903 FORWARD LENGTH=451
Repeat List (scaffold517)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44724.1	1	450	450	88.66	450	89	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GN34_POPTR	1	446	446	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44724.1	1	450	450	84	450	84	0
Target_name	Start	End	Length	Cov(%)
AT4G24550.2	2	451	451	99.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold517	Augus-PASA	mRNA	80458	85924	.	-	.	ID=Dca44724.1;Parent=Dca44724
scaffold517	Augus-PASA	exon	80458	80556	.	-	.	ID=Dca44724.1.exon1;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	80981	81054	.	-	.	ID=Dca44724.1.exon2;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	81172	81232	.	-	.	ID=Dca44724.1.exon3;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	81333	81420	.	-	.	ID=Dca44724.1.exon4;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	81658	81752	.	-	.	ID=Dca44724.1.exon5;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	82351	82455	.	-	.	ID=Dca44724.1.exon6;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	82553	82653	.	-	.	ID=Dca44724.1.exon7;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	82752	82878	.	-	.	ID=Dca44724.1.exon8;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	83042	83170	.	-	.	ID=Dca44724.1.exon9;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	83293	83409	.	-	.	ID=Dca44724.1.exon10;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	83690	83893	.	-	.	ID=Dca44724.1.exon11;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	85159	85253	.	-	.	ID=Dca44724.1.exon12;Parent=Dca44724.1
scaffold517	Augus-PASA	exon	85867	85924	.	-	.	ID=Dca44724.1.exon13;Parent=Dca44724.1