Dca44728.1
Annotation
- 3-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold517)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44728.1 |
2 |
437 |
1107 |
21.86 |
436 |
54 |
3e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
3 |
449 |
1333 |
33.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44728.1 |
361 |
1097 |
1107 |
29.53 |
737 |
39 |
3e-167
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
349 |
1183 |
1428 |
58.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold517 |
Augustus |
mRNA |
128430 |
132067 |
. |
- |
. |
ID=Dca44728.1;Parent=Dca44728 |
| scaffold517 |
Augustus |
exon |
128430 |
128664 |
. |
- |
. |
ID=Dca44728.1.exon1;Parent=Dca44728.1 |
| scaffold517 |
Augustus |
exon |
128794 |
131220 |
. |
- |
. |
ID=Dca44728.1.exon2;Parent=Dca44728.1 |
| scaffold517 |
Augustus |
exon |
131406 |
132067 |
. |
- |
. |
ID=Dca44728.1.exon3;Parent=Dca44728.1 |
