Carnation DB

Dca44745.1

Annotation

5-exons
f-1
sp|B9HAT5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_654203#unknown#0F0P0C
Repeat List (scaffold5176)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44745.1	4	243	246	45.12	240	41	3e-35
Target_name	Start	End	Length	Cov(%)
sp\|B9HAT5_POPTR	3	258	262	97.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44745.1	2	239	246	37.8	238	37	8e-23
Target_name	Start	End	Length	Cov(%)
AT4G32030.1	11	246	253	93.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5176	Augustus	mRNA	17827	20299	.	-	.	ID=Dca44745.1;Parent=Dca44745
scaffold5176	Augustus	exon	17827	18033	.	-	.	ID=Dca44745.1.exon1;Parent=Dca44745.1
scaffold5176	Augustus	exon	18122	18190	.	-	.	ID=Dca44745.1.exon2;Parent=Dca44745.1
scaffold5176	Augustus	exon	18285	18347	.	-	.	ID=Dca44745.1.exon3;Parent=Dca44745.1
scaffold5176	Augustus	exon	18474	18530	.	-	.	ID=Dca44745.1.exon4;Parent=Dca44745.1
scaffold5176	Augustus	exon	19955	20299	.	-	.	ID=Dca44745.1.exon5;Parent=Dca44745.1