Carnation DB

Dca44746.1

Annotation

7-exons
f-1
sp|F6HNR6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02710#GO:0005089#1F0P0C
AT5G05940.1 | Symbols: ATROPGEF5, ROPGEF5 | ROP guanine nucleotide exchange factor 5 | chr5:1786028-1788363 FORWARD LENGTH=611
Repeat List (scaffold5177)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44746.1	42	591	591	64.12	550	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HNR6_VITVI	56	594	596	90.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44746.1	45	556	591	56.34	512	64	0
Target_name	Start	End	Length	Cov(%)
AT5G05940.1	60	577	611	84.77

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5177	Augustus	mRNA	4653	7902	.	+	.	ID=Dca44746.1;Parent=Dca44746
scaffold5177	Augustus	exon	4653	4902	.	+	.	ID=Dca44746.1.exon1;Parent=Dca44746.1
scaffold5177	Augustus	exon	5014	5130	.	+	.	ID=Dca44746.1.exon2;Parent=Dca44746.1
scaffold5177	Augustus	exon	6096	6250	.	+	.	ID=Dca44746.1.exon3;Parent=Dca44746.1
scaffold5177	Augustus	exon	6344	6418	.	+	.	ID=Dca44746.1.exon4;Parent=Dca44746.1
scaffold5177	Augustus	exon	6522	6815	.	+	.	ID=Dca44746.1.exon5;Parent=Dca44746.1
scaffold5177	Augustus	exon	6904	7263	.	+	.	ID=Dca44746.1.exon6;Parent=Dca44746.1
scaffold5177	Augustus	exon	7378	7902	.	+	.	ID=Dca44746.1.exon7;Parent=Dca44746.1