Carnation DB

Dca44763.1

Annotation

8-exons
f-1
sp|D7U8J7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0032g00290#GO:0003676;GO:0000166#2F0P0C
AT5G32450.1 | Symbols: | RNA binding (RRM/RBD/RNP motifs) family protein | chr5:12079707-12081317 FORWARD LENGTH=267
Repeat List (scaffold5180)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44763.1	3	260	263	67.3	258	68	4e-97
Target_name	Start	End	Length	Cov(%)
sp\|D7U8J7_VITVI	2	264	268	98.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44763.1	1	261	263	67.3	261	67	3e-96
Target_name	Start	End	Length	Cov(%)
AT5G32450.1	1	265	267	99.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5180	Augus-PASA	mRNA	7795	11389	.	-	.	ID=Dca44763.1;Parent=Dca44763
scaffold5180	Augus-PASA	exon	7795	7812	.	-	.	ID=Dca44763.1.exon1;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	8102	8225	.	-	.	ID=Dca44763.1.exon2;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	9152	9477	.	-	.	ID=Dca44763.1.exon3;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	9737	9802	.	-	.	ID=Dca44763.1.exon4;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	9890	9958	.	-	.	ID=Dca44763.1.exon5;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	10776	10851	.	-	.	ID=Dca44763.1.exon6;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	11161	11267	.	-	.	ID=Dca44763.1.exon7;Parent=Dca44763.1
scaffold5180	Augus-PASA	exon	11384	11389	.	-	.	ID=Dca44763.1.exon8;Parent=Dca44763.1