Carnation DB

Dca44874.1

Annotation

7-exons
f-1
sp|B9HJ67_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_564570#GO:0005622;GO:0008270#1F0P1C
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr1:25559384-25561004 FORWARD LENGTH=356
Repeat List (scaffold520)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44874.1	138	576	598	31.77	439	38	3e-71
Target_name	Start	End	Length	Cov(%)
sp\|B9HJ67_POPTR	1	494	497	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44874.1	133	442	598	21.07	310	41	2e-52
Target_name	Start	End	Length	Cov(%)
AT1G68190.1	5	264	356	73.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold520	Augustus	mRNA	88068	95263	.	+	.	ID=Dca44874.1;Parent=Dca44874
scaffold520	Augustus	exon	88068	88300	.	+	.	ID=Dca44874.1.exon1;Parent=Dca44874.1
scaffold520	Augustus	exon	88419	88596	.	+	.	ID=Dca44874.1.exon2;Parent=Dca44874.1
scaffold520	Augustus	exon	93129	93566	.	+	.	ID=Dca44874.1.exon3;Parent=Dca44874.1
scaffold520	Augus-PASA	exon	93741	94097	.	+	.	ID=Dca44874.1.exon4;Parent=Dca44874.1
scaffold520	Augus-PASA	exon	94179	94379	.	+	.	ID=Dca44874.1.exon5;Parent=Dca44874.1
scaffold520	Augus-PASA	exon	94477	94739	.	+	.	ID=Dca44874.1.exon6;Parent=Dca44874.1
scaffold520	Augus-PASA	exon	95137	95263	.	+	.	ID=Dca44874.1.exon7;Parent=Dca44874.1