Dca44881.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold5201)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44881.1 |
45 |
292 |
301 |
30.89 |
248 |
34 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
32 |
310 |
1501 |
18.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca44881.1 |
49 |
170 |
301 |
13.28 |
122 |
33 |
3e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
201 |
296 |
41.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5201 |
Augustus |
mRNA |
6472 |
7454 |
. |
- |
. |
ID=Dca44881.1;Parent=Dca44881 |
| scaffold5201 |
Augustus |
exon |
6472 |
6849 |
. |
- |
. |
ID=Dca44881.1.exon1;Parent=Dca44881.1 |
| scaffold5201 |
Augustus |
exon |
6927 |
7454 |
. |
- |
. |
ID=Dca44881.1.exon2;Parent=Dca44881.1 |
