Carnation DB

Dca44899.1

Annotation

5-exons
f-1
sp|B9HL68_POPTR#NAC domain protein, IPR003441#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=NAC047#GO:0003677;GO:0006355#1F1P0C
Repeat List (scaffold521)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44899.1	8	546	546	49.08	539	47	2e-115
Target_name	Start	End	Length	Cov(%)
sp\|B9HL68_POPTR	3	565	565	99.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44899.1	9	546	546	44.5	538	42	5e-102
Target_name	Start	End	Length	Cov(%)
AT5G04410.1	3	567	567	99.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold521	Augus-PASA	mRNA	37009	40593	.	+	.	ID=Dca44899.1;Parent=Dca44899
scaffold521	Augus-PASA	exon	37009	37192	.	+	.	ID=Dca44899.1.exon1;Parent=Dca44899.1
scaffold521	Augus-PASA	exon	37798	38264	.	+	.	ID=Dca44899.1.exon2;Parent=Dca44899.1
scaffold521	Augus-PASA	exon	39365	39856	.	+	.	ID=Dca44899.1.exon3;Parent=Dca44899.1
scaffold521	Augus-PASA	exon	39956	40073	.	+	.	ID=Dca44899.1.exon4;Parent=Dca44899.1
scaffold521	Augus-PASA	exon	40214	40593	.	+	.	ID=Dca44899.1.exon5;Parent=Dca44899.1