Carnation DB

Dca44919.1

Annotation

8-exons
f-1
sp|D7SQC7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00660#GO:0030246;GO:0016853;GO:0005975#2F1P0C
Os04t0658000-02 Similar to Possible apospory-associated like protein.
Repeat List (scaffold5213)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44919.1	22	324	324	80.24	303	85	5e-156
Target_name	Start	End	Length	Cov(%)
sp\|D7SQC7_VITVI	8	314	314	97.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44919.1	26	324	324	74.69	299	80	2e-145
Target_name	Start	End	Length	Cov(%)
Os04t0658000-02	34	336	345	87.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5213	Augus-PASA	mRNA	212	7608	.	+	.	ID=Dca44919.1;Parent=Dca44919
scaffold5213	Augus-PASA	exon	212	346	.	+	.	ID=Dca44919.1.exon1;Parent=Dca44919.1
scaffold5213	Augus-PASA	exon	4270	4344	.	+	.	ID=Dca44919.1.exon2;Parent=Dca44919.1
scaffold5213	Augus-PASA	exon	4830	4886	.	+	.	ID=Dca44919.1.exon3;Parent=Dca44919.1
scaffold5213	Augus-PASA	exon	4995	5149	.	+	.	ID=Dca44919.1.exon4;Parent=Dca44919.1
scaffold5213	Augus-PASA	exon	5380	5514	.	+	.	ID=Dca44919.1.exon5;Parent=Dca44919.1
scaffold5213	Augus-PASA	exon	6202	6304	.	+	.	ID=Dca44919.1.exon6;Parent=Dca44919.1
scaffold5213	Augus-PASA	exon	6383	6482	.	+	.	ID=Dca44919.1.exon7;Parent=Dca44919.1
scaffold5213	Augustus	exon	7394	7608	.	+	.	ID=Dca44919.1.exon8;Parent=Dca44919.1