Carnation DB

Dca44922.1

Annotation

6-exons
f-1
sp|Q5CZ54_SOLTU#Pom14 protein#Solanum tuberosum (Potato)#Name=pom14#GO:0016021#0F0P1C
Repeat List (scaffold5213)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44922.1	1	139	140	63.57	139	62	5e-47
Target_name	Start	End	Length	Cov(%)
sp\|Q5CZ54_SOLTU	1	145	146	99.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44922.1	1	139	140	58.57	139	57	1e-44
Target_name	Start	End	Length	Cov(%)
Os05t0111200-01	1	145	147	98.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5213	Augus-PASA	mRNA	38037	40280	.	+	.	ID=Dca44922.1;Parent=Dca44922
scaffold5213	Augus-PASA	exon	38037	38132	.	+	.	ID=Dca44922.1.exon1;Parent=Dca44922.1
scaffold5213	Augus-PASA	exon	38390	38441	.	+	.	ID=Dca44922.1.exon2;Parent=Dca44922.1
scaffold5213	Augus-PASA	exon	39404	39435	.	+	.	ID=Dca44922.1.exon3;Parent=Dca44922.1
scaffold5213	Augus-PASA	exon	39839	39872	.	+	.	ID=Dca44922.1.exon4;Parent=Dca44922.1
scaffold5213	Augus-PASA	exon	39977	40044	.	+	.	ID=Dca44922.1.exon5;Parent=Dca44922.1
scaffold5213	Augus-PASA	exon	40140	40280	.	+	.	ID=Dca44922.1.exon6;Parent=Dca44922.1