Carnation DB

Dca44927.1

Annotation

5-exons
f-168
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold5216)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44927.1	146	214	215	15.34	69	48	9e-11
Target_name	Start	End	Length	Cov(%)
sp\|A2I5E5_BETVU	54	122	1501	4.59

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5216	Augustus	mRNA	3393	5828	.	+	.	ID=Dca44927.1;Parent=Dca44927
scaffold5216	Augustus	exon	3393	3589	.	+	.	ID=Dca44927.1.exon1;Parent=Dca44927.1
scaffold5216	Augustus	exon	3910	3986	.	+	.	ID=Dca44927.1.exon2;Parent=Dca44927.1
scaffold5216	Augustus	exon	4523	4642	.	+	.	ID=Dca44927.1.exon3;Parent=Dca44927.1
scaffold5216	Augustus	exon	5455	5498	.	+	.	ID=Dca44927.1.exon4;Parent=Dca44927.1
scaffold5216	Augustus	exon	5617	5828	.	+	.	ID=Dca44927.1.exon5;Parent=Dca44927.1