Carnation DB

Dca44974.1

Annotation

9-exons
f-1
sp|F6H0A8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g15710#GO:0016209;GO:0016491#2F0P0C
AT1G21350.3 | Symbols: | Thioredoxin superfamily protein | chr1:7477376-7479012 REVERSE LENGTH=252
Repeat List (scaffold5224)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44974.1	10	242	243	72.83	233	76	3e-99
Target_name	Start	End	Length	Cov(%)
sp\|F6H0A8_VITVI	18	248	248	93.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca44974.1	42	243	243	65.43	202	79	2e-93
Target_name	Start	End	Length	Cov(%)
AT1G21350.3	50	251	252	80.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5224	Augustus	mRNA	11035	13632	.	+	.	ID=Dca44974.1;Parent=Dca44974
scaffold5224	Augustus	exon	11035	11244	.	+	.	ID=Dca44974.1.exon1;Parent=Dca44974.1
scaffold5224	Augustus	exon	11345	11410	.	+	.	ID=Dca44974.1.exon2;Parent=Dca44974.1
scaffold5224	Augustus	exon	12148	12228	.	+	.	ID=Dca44974.1.exon3;Parent=Dca44974.1
scaffold5224	Augustus	exon	12310	12363	.	+	.	ID=Dca44974.1.exon4;Parent=Dca44974.1
scaffold5224	Augustus	exon	12448	12516	.	+	.	ID=Dca44974.1.exon5;Parent=Dca44974.1
scaffold5224	Augustus	exon	13036	13098	.	+	.	ID=Dca44974.1.exon6;Parent=Dca44974.1
scaffold5224	Augustus	exon	13267	13349	.	+	.	ID=Dca44974.1.exon7;Parent=Dca44974.1
scaffold5224	Augustus	exon	13442	13507	.	+	.	ID=Dca44974.1.exon8;Parent=Dca44974.1
scaffold5224	Augustus	exon	13593	13632	.	+	.	ID=Dca44974.1.exon9;Parent=Dca44974.1