Carnation DB

Dca4513.1

Annotation

5-exons
f-1
sp|D7U1F8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0037g00750#GO:0005634;GO:0007049#0F1P1C
Os06t0171700-01 Cdk-activating kinase assembly factor (MAT1) family protein.
Repeat List (scaffold117)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4513.1	1	190	190	66.31	190	66	1e-58
Target_name	Start	End	Length	Cov(%)
sp\|D7U1F8_VITVI	1	189	189	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4513.1	1	190	190	55.78	190	55	5e-50
Target_name	Start	End	Length	Cov(%)
Os06t0171700-01	1	195	196	99.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold117	Augus-PASA	mRNA	130904	134891	.	-	.	ID=Dca4513.1;Parent=Dca4513
scaffold117	Augus-PASA	exon	130904	131167	.	-	.	ID=Dca4513.1.exon1;Parent=Dca4513.1
scaffold117	Augus-PASA	exon	132540	132602	.	-	.	ID=Dca4513.1.exon2;Parent=Dca4513.1
scaffold117	Augus-PASA	exon	132712	132815	.	-	.	ID=Dca4513.1.exon3;Parent=Dca4513.1
scaffold117	Augus-PASA	exon	132904	132977	.	-	.	ID=Dca4513.1.exon4;Parent=Dca4513.1
scaffold117	Augus-PASA	exon	134824	134891	.	-	.	ID=Dca4513.1.exon5;Parent=Dca4513.1