Carnation DB

Dca4534.1

Annotation

5-exons
f-1
sp|A5AHF5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_026270#unknown#0F0P0C
Os11t0656500-01 Integrase, catalytic core domain containing protein.
Repeat List (scaffold117)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4534.1	1	196	438	23.28	196	53	1e-49
Target_name	Start	End	Length	Cov(%)
sp\|A5AHF5_VITVI	154	322	492	34.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4534.1	1	176	438	16.43	176	33	1e-20
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	996	1208	1401	15.2

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold117	Augustus	mRNA	292610	294543	.	-	.	ID=Dca4534.1;Parent=Dca4534
scaffold117	Augustus	exon	292610	293064	.	-	.	ID=Dca4534.1.exon1;Parent=Dca4534.1
scaffold117	Augustus	exon	293182	293475	.	-	.	ID=Dca4534.1.exon2;Parent=Dca4534.1
scaffold117	Augustus	exon	293637	293675	.	-	.	ID=Dca4534.1.exon3;Parent=Dca4534.1
scaffold117	Augustus	exon	293793	294172	.	-	.	ID=Dca4534.1.exon4;Parent=Dca4534.1
scaffold117	Augustus	exon	294395	294543	.	-	.	ID=Dca4534.1.exon5;Parent=Dca4534.1