Carnation DB

Dca4546.1

Annotation

5-exons
f-1
sp|A5BHF8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_009109#GO:0016740#1F0P0C
Os07t0408700-02 Similar to Spermidine synthase 2 (EC 2.5.1.16) (Putrescine aminopropyltransferase 2) (SPDSY 2).
Repeat List (scaffold1170)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4546.1	17	226	231	52.81	210	58	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|A5BHF8_VITVI	99	310	313	67.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4546.1	17	226	231	51.08	210	56	1e-68
Target_name	Start	End	Length	Cov(%)
Os07t0408700-02	109	320	324	65.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1170	Augustus	mRNA	70555	71667	.	+	.	ID=Dca4546.1;Parent=Dca4546
scaffold1170	Augustus	exon	70555	70713	.	+	.	ID=Dca4546.1.exon1;Parent=Dca4546.1
scaffold1170	Augustus	exon	70827	70971	.	+	.	ID=Dca4546.1.exon2;Parent=Dca4546.1
scaffold1170	Augustus	exon	71094	71318	.	+	.	ID=Dca4546.1.exon3;Parent=Dca4546.1
scaffold1170	Augustus	exon	71405	71499	.	+	.	ID=Dca4546.1.exon4;Parent=Dca4546.1
scaffold1170	Augustus	exon	71596	71667	.	+	.	ID=Dca4546.1.exon5;Parent=Dca4546.1