Dca45502.1
Annotation
- 3-exons
- f-1
- sp|B9N0T3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_597064#unknown#0F0P0C
- Repeat List (scaffold5340)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45502.1 |
564 |
729 |
729 |
9.05 |
166 |
38 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N0T3_POPTR |
369 |
537 |
537 |
31.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45502.1 |
643 |
729 |
729 |
5.76 |
87 |
48 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G43490.1 |
99 |
185 |
185 |
47.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5340 |
Augustus |
mRNA |
7647 |
11285 |
. |
- |
. |
ID=Dca45502.1;Parent=Dca45502 |
| scaffold5340 |
Augustus |
exon |
7647 |
8533 |
. |
- |
. |
ID=Dca45502.1.exon1;Parent=Dca45502.1 |
| scaffold5340 |
Augustus |
exon |
8776 |
10000 |
. |
- |
. |
ID=Dca45502.1.exon2;Parent=Dca45502.1 |
| scaffold5340 |
Augustus |
exon |
11208 |
11285 |
. |
- |
. |
ID=Dca45502.1.exon3;Parent=Dca45502.1 |
