Carnation DB

Dca45526.1

Annotation

8-exons
f-1
sp|F6HNU2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g02260#unknown#0F0P0C
sp|B9SDZ9_RICCO#Speckle-type POZ protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1481430#unknown#0F0P0C
Repeat List (scaffold535)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45526.1	11	251	460	39.56	241	76	6e-108
Target_name	Start	End	Length	Cov(%)
sp\|F6HNU2_VITVI	5	246	406	59.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45526.1	18	251	460	35.21	234	69	2e-99
Target_name	Start	End	Length	Cov(%)
AT2G39760.1	14	248	408	57.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold535	Augustus	mRNA	6033	8983	.	+	.	ID=Dca45526.1;Parent=Dca45526
scaffold535	Augustus	exon	6033	6784	.	+	.	ID=Dca45526.1.exon1;Parent=Dca45526.1
scaffold535	Augustus	exon	6973	7018	.	+	.	ID=Dca45526.1.exon2;Parent=Dca45526.1
scaffold535	Augus-PASA	exon	7094	7189	.	+	.	ID=Dca45526.1.exon3;Parent=Dca45526.1
scaffold535	Augus-PASA	exon	7315	7404	.	+	.	ID=Dca45526.1.exon4;Parent=Dca45526.1
scaffold535	Augus-PASA	exon	7536	7628	.	+	.	ID=Dca45526.1.exon5;Parent=Dca45526.1
scaffold535	Augus-PASA	exon	7733	7828	.	+	.	ID=Dca45526.1.exon6;Parent=Dca45526.1
scaffold535	Augus-PASA	exon	8286	8351	.	+	.	ID=Dca45526.1.exon7;Parent=Dca45526.1
scaffold535	Augus-PASA	exon	8840	8983	.	+	.	ID=Dca45526.1.exon8;Parent=Dca45526.1