Dca45560.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold5357)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45560.1 |
130 |
533 |
602 |
39.53 |
404 |
59 |
1e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
374 |
750 |
1717 |
21.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45560.1 |
272 |
377 |
602 |
6.31 |
106 |
34 |
6e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
77 |
189 |
192 |
58.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5357 |
Augustus |
mRNA |
3025 |
5162 |
. |
- |
. |
ID=Dca45560.1;Parent=Dca45560 |
| scaffold5357 |
Augustus |
exon |
3025 |
4160 |
. |
- |
. |
ID=Dca45560.1.exon1;Parent=Dca45560.1 |
| scaffold5357 |
Augustus |
exon |
4220 |
4531 |
. |
- |
. |
ID=Dca45560.1.exon2;Parent=Dca45560.1 |
| scaffold5357 |
Augustus |
exon |
4802 |
5162 |
. |
- |
. |
ID=Dca45560.1.exon3;Parent=Dca45560.1 |
