Carnation DB

Dca45632.1

Annotation

5-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold5372)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45632.1	679	839	917	5.34	161	30	2e-15
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	857	1019	1110	14.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45632.1	100	598	917	17.44	499	31	7e-66
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	62	571	857	59.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5372	Augustus	mRNA	39658	43034	.	-	.	ID=Dca45632.1;Parent=Dca45632
scaffold5372	Augustus	exon	39658	40343	.	-	.	ID=Dca45632.1.exon1;Parent=Dca45632.1
scaffold5372	Augustus	exon	40411	40646	.	-	.	ID=Dca45632.1.exon2;Parent=Dca45632.1
scaffold5372	Augustus	exon	40773	41972	.	-	.	ID=Dca45632.1.exon3;Parent=Dca45632.1
scaffold5372	Augustus	exon	42051	42444	.	-	.	ID=Dca45632.1.exon4;Parent=Dca45632.1
scaffold5372	Augustus	exon	42797	43034	.	-	.	ID=Dca45632.1.exon5;Parent=Dca45632.1