Carnation DB

Dca4566.1

Annotation

10-exons
f-1
sp|C5XB10_SORBI#Putative uncharacterized protein Sb02g004430#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb02g004430#GO:0003755;GO:0006457#1F1P0C
AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein | chr3:23412449-23415435 FORWARD LENGTH=570
Repeat List (scaffold1171)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4566.1	1	586	595	42.18	586	40	3e-64
Target_name	Start	End	Length	Cov(%)
sp\|C5XB10_SORBI	31	648	648	95.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4566.1	1	178	595	17.81	178	55	6e-49
Target_name	Start	End	Length	Cov(%)
AT3G63400.1	31	225	570	34.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1171	Augus-PASA	mRNA	46107	49718	.	-	.	ID=Dca4566.1;Parent=Dca4566
scaffold1171	Augus-PASA	exon	46107	46464	.	-	.	ID=Dca4566.1.exon1;Parent=Dca4566.1
scaffold1171	Augus-PASA	exon	46604	46681	.	-	.	ID=Dca4566.1.exon2;Parent=Dca4566.1
scaffold1171	Augus-PASA	exon	46947	47264	.	-	.	ID=Dca4566.1.exon3;Parent=Dca4566.1
scaffold1171	Augus-PASA	exon	47391	47571	.	-	.	ID=Dca4566.1.exon4;Parent=Dca4566.1
scaffold1171	Augustus	exon	47985	48070	.	-	.	ID=Dca4566.1.exon5;Parent=Dca4566.1
scaffold1171	Augustus	exon	48165	48507	.	-	.	ID=Dca4566.1.exon6;Parent=Dca4566.1
scaffold1171	Augustus	exon	48602	48762	.	-	.	ID=Dca4566.1.exon7;Parent=Dca4566.1
scaffold1171	Augustus	exon	48857	48974	.	-	.	ID=Dca4566.1.exon8;Parent=Dca4566.1
scaffold1171	Augustus	exon	49215	49239	.	-	.	ID=Dca4566.1.exon9;Parent=Dca4566.1
scaffold1171	Augustus	exon	49599	49718	.	-	.	ID=Dca4566.1.exon10;Parent=Dca4566.1