Dca45673.1
Annotation
- 2-exons
- f-1
- sp|Q9SJ83_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g04760#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold5380)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45673.1 |
66 |
393 |
427 |
29.97 |
328 |
36 |
7e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9SJ83_ARATH |
1 |
362 |
631 |
57.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45673.1 |
3 |
209 |
427 |
15.92 |
207 |
33 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G43760.1 |
373 |
581 |
626 |
33.38 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5380 |
Augustus |
mRNA |
244 |
1842 |
. |
+ |
. |
ID=Dca45673.1;Parent=Dca45673 |
| scaffold5380 |
Augustus |
exon |
244 |
868 |
. |
+ |
. |
ID=Dca45673.1.exon1;Parent=Dca45673.1 |
| scaffold5380 |
Augustus |
exon |
1184 |
1842 |
. |
+ |
. |
ID=Dca45673.1.exon2;Parent=Dca45673.1 |
