Carnation DB

Dca45674.1

Annotation

7-exons
f-1
sp|F4NCG3_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold5380)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45674.1	16	185	218	25.68	170	33	5e-17
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG3_BETVU	857	1025	1114	15.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45674.1	118	185	218	12.38	68	40	9e-10
Target_name	Start	End	Length	Cov(%)
AT2G02520.1	41	108	211	32.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5380	Augustus	mRNA	1922	8007	.	+	.	ID=Dca45674.1;Parent=Dca45674
scaffold5380	Augustus	exon	1922	2503	.	+	.	ID=Dca45674.1.exon1;Parent=Dca45674.1
scaffold5380	Augustus	exon	5992	6065	.	+	.	ID=Dca45674.1.exon2;Parent=Dca45674.1
scaffold5380	Augustus	exon	6142	6770	.	+	.	ID=Dca45674.1.exon3;Parent=Dca45674.1
scaffold5380	Augustus	exon	7000	7081	.	+	.	ID=Dca45674.1.exon4;Parent=Dca45674.1
scaffold5380	Augustus	exon	7173	7311	.	+	.	ID=Dca45674.1.exon5;Parent=Dca45674.1
scaffold5380	Augustus	exon	7409	7711	.	+	.	ID=Dca45674.1.exon6;Parent=Dca45674.1
scaffold5380	Augustus	exon	7792	8007	.	+	.	ID=Dca45674.1.exon7;Parent=Dca45674.1