Dca45679.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5381)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45679.1 |
1 |
166 |
209 |
58.37 |
166 |
74 |
2e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
638 |
803 |
896 |
18.52 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45679.1 |
37 |
164 |
209 |
23.44 |
128 |
39 |
1e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1303 |
1401 |
9.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5381 |
Augustus |
mRNA |
9583 |
12993 |
. |
- |
. |
ID=Dca45679.1;Parent=Dca45679 |
| scaffold5381 |
Augustus |
exon |
9583 |
9718 |
. |
- |
. |
ID=Dca45679.1.exon1;Parent=Dca45679.1 |
| scaffold5381 |
Augustus |
exon |
12500 |
12993 |
. |
- |
. |
ID=Dca45679.1.exon2;Parent=Dca45679.1 |
