Carnation DB

Dca4569.1

Annotation

6-exons
f-1
sp|F6HBI7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0179g00210#GO:0005488#1F0P0C
AT1G03060.1 | Symbols: SPI | Beige/BEACH domain ;WD domain, G-beta repeat protein | chr1:712971-726891 REVERSE LENGTH=3601
Repeat List (scaffold1171)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4569.1	1	226	256	50	226	55	2e-61
Target_name	Start	End	Length	Cov(%)
sp\|F6HBI7_VITVI	1	228	3534	6.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4569.1	1	223	256	46.87	223	51	1e-55
Target_name	Start	End	Length	Cov(%)
AT1G03060.1	1	223	3601	6.19

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1171	Augustus	mRNA	69158	71947	.	-	.	ID=Dca4569.1;Parent=Dca4569
scaffold1171	Augustus	exon	69158	69430	.	-	.	ID=Dca4569.1.exon1;Parent=Dca4569.1
scaffold1171	Augustus	exon	70262	70318	.	-	.	ID=Dca4569.1.exon2;Parent=Dca4569.1
scaffold1171	Augustus	exon	70418	70553	.	-	.	ID=Dca4569.1.exon3;Parent=Dca4569.1
scaffold1171	Augustus	exon	70751	70824	.	-	.	ID=Dca4569.1.exon4;Parent=Dca4569.1
scaffold1171	Augustus	exon	70909	70978	.	-	.	ID=Dca4569.1.exon5;Parent=Dca4569.1
scaffold1171	Augustus	exon	71787	71947	.	-	.	ID=Dca4569.1.exon6;Parent=Dca4569.1