Carnation DB

Dca45708.1

Annotation

7-exons
f-1
sp|D7TB70_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g02120#GO:0003743#1F0P0C
AT5G11900.1 | Symbols: | Translation initiation factor SUI1 family protein | chr5:3834154-3836023 FORWARD LENGTH=198
Repeat List (scaffold539)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45708.1	1	188	188	82.44	188	79	2e-84
Target_name	Start	End	Length	Cov(%)
sp\|D7TB70_VITVI	1	197	197	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45708.1	1	188	188	79.78	188	76	7e-83
Target_name	Start	End	Length	Cov(%)
AT5G11900.1	1	198	198	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold539	Augus-PASA	mRNA	32558	38616	.	+	.	ID=Dca45708.1;Parent=Dca45708
scaffold539	Augus-PASA	exon	32558	32705	.	+	.	ID=Dca45708.1.exon1;Parent=Dca45708.1
scaffold539	Augus-PASA	exon	33194	33256	.	+	.	ID=Dca45708.1.exon2;Parent=Dca45708.1
scaffold539	Augus-PASA	exon	35588	35652	.	+	.	ID=Dca45708.1.exon3;Parent=Dca45708.1
scaffold539	Augus-PASA	exon	37522	37603	.	+	.	ID=Dca45708.1.exon4;Parent=Dca45708.1
scaffold539	Augus-PASA	exon	37698	37765	.	+	.	ID=Dca45708.1.exon5;Parent=Dca45708.1
scaffold539	Augus-PASA	exon	37945	38028	.	+	.	ID=Dca45708.1.exon6;Parent=Dca45708.1
scaffold539	Augus-PASA	exon	38560	38616	.	+	.	ID=Dca45708.1.exon7;Parent=Dca45708.1