Dca45720.1
Annotation
- 3-exons
- f-1
- sp|A2Y7S3_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_21092#GO:0003676;GO:0008270#2F0P0C
- sp|Q7XE42_ORYSJ#Transposon protein, putative, Mutator sub-class#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os10g30240#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold539)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45720.1 |
2 |
419 |
485 |
28.65 |
418 |
33 |
8e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2Y7S3_ORYSI |
437 |
854 |
1005 |
41.59 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45720.1 |
4 |
419 |
485 |
27.62 |
416 |
32 |
8e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0704400-02 |
276 |
686 |
805 |
51.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold539 |
Augustus |
mRNA |
109857 |
111810 |
. |
+ |
. |
ID=Dca45720.1;Parent=Dca45720 |
| scaffold539 |
Augustus |
exon |
109857 |
110213 |
. |
+ |
. |
ID=Dca45720.1.exon1;Parent=Dca45720.1 |
| scaffold539 |
Augustus |
exon |
110617 |
110971 |
. |
+ |
. |
ID=Dca45720.1.exon2;Parent=Dca45720.1 |
| scaffold539 |
Augustus |
exon |
111065 |
111810 |
. |
+ |
. |
ID=Dca45720.1.exon3;Parent=Dca45720.1 |
