Dca45727.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold5390)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45727.1 |
128 |
516 |
516 |
41.47 |
389 |
55 |
2e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
54 |
445 |
964 |
40.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45727.1 |
155 |
436 |
516 |
21.51 |
282 |
39 |
3e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
492 |
779 |
1428 |
20.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5390 |
Augustus |
mRNA |
15782 |
17565 |
. |
+ |
. |
ID=Dca45727.1;Parent=Dca45727 |
| scaffold5390 |
Augustus |
exon |
15782 |
16154 |
. |
+ |
. |
ID=Dca45727.1.exon1;Parent=Dca45727.1 |
| scaffold5390 |
Augustus |
exon |
16388 |
17565 |
. |
+ |
. |
ID=Dca45727.1.exon2;Parent=Dca45727.1 |
