Carnation DB

Dca45790.1

Annotation

8-exons
f-1
sp|D7KLX0_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_681364#GO:0005524;GO:0005509;GO:0004674#3F0P0C
AT1G35670.1 | Symbols: ATCDPK2, CPK11, ATCPK11, CDPK2 | calcium-dependent protein kinase 2 | chr1:13205456-13208058 FORWARD LENGTH=495
Repeat List (scaffold54)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45790.1	16	483	485	80.2	468	84	0
Target_name	Start	End	Length	Cov(%)
sp\|D7KLX0_ARALL	1	468	495	94.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45790.1	16	483	485	79.58	468	83	0
Target_name	Start	End	Length	Cov(%)
AT1G35670.1	1	468	495	94.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold54	Augus-PASA	mRNA	296843	300410	.	-	.	ID=Dca45790.1;Parent=Dca45790
scaffold54	Augus-PASA	exon	296843	296908	.	-	.	ID=Dca45790.1.exon1;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	297213	297437	.	-	.	ID=Dca45790.1.exon2;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	297525	297692	.	-	.	ID=Dca45790.1.exon3;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	297952	298067	.	-	.	ID=Dca45790.1.exon4;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	298159	298311	.	-	.	ID=Dca45790.1.exon5;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	298398	298541	.	-	.	ID=Dca45790.1.exon6;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	299146	299361	.	-	.	ID=Dca45790.1.exon7;Parent=Dca45790.1
scaffold54	Augus-PASA	exon	300041	300410	.	-	.	ID=Dca45790.1.exon8;Parent=Dca45790.1