Carnation DB

Dca45802.1

Annotation

6-exons
f-1
sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Os06t0484800-00 Reverse transcriptase domain containing protein.
Repeat List (scaffold540)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45802.1	3	692	1271	20.22	690	37	1e-137
Target_name	Start	End	Length	Cov(%)
sp\|F4NCG1_BETVU	384	1075	1110	62.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45802.1	8	560	1271	12.82	553	30	2e-64
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	306	856	857	64.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold540	Augustus	mRNA	30259	36445	.	+	.	ID=Dca45802.1;Parent=Dca45802
scaffold540	Augustus	exon	30259	32411	.	+	.	ID=Dca45802.1.exon1;Parent=Dca45802.1
scaffold540	Augustus	exon	34052	34178	.	+	.	ID=Dca45802.1.exon2;Parent=Dca45802.1
scaffold540	Augustus	exon	34513	34957	.	+	.	ID=Dca45802.1.exon3;Parent=Dca45802.1
scaffold540	Augustus	exon	35184	35345	.	+	.	ID=Dca45802.1.exon4;Parent=Dca45802.1
scaffold540	Augustus	exon	35435	35802	.	+	.	ID=Dca45802.1.exon5;Parent=Dca45802.1
scaffold540	Augustus	exon	35885	36445	.	+	.	ID=Dca45802.1.exon6;Parent=Dca45802.1