Dca45808.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQQ6_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14430#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold540)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45808.1 |
6 |
463 |
463 |
31.53 |
458 |
31 |
3e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQQ6_ARATH |
301 |
742 |
1277 |
34.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45808.1 |
225 |
463 |
463 |
17.92 |
239 |
35 |
6e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
264 |
496 |
857 |
27.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold540 |
Augustus |
mRNA |
79445 |
81059 |
. |
- |
. |
ID=Dca45808.1;Parent=Dca45808 |
| scaffold540 |
Augustus |
exon |
79445 |
80161 |
. |
- |
. |
ID=Dca45808.1.exon1;Parent=Dca45808.1 |
| scaffold540 |
Augustus |
exon |
80385 |
81059 |
. |
- |
. |
ID=Dca45808.1.exon2;Parent=Dca45808.1 |
