Dca45956.1
Annotation
- 2-exons
- f-1
- sp|D7LY48_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_911337#GO:0016021;GO:0005215#1F0P1C
- AT4G10380.1 | Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsic protein 5;1 | chr4:6431530-6434510 REVERSE LENGTH=304
- Repeat List (scaffold5436)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45956.1 |
2 |
140 |
150 |
66.66 |
139 |
72 |
5e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LY48_ARALL |
81 |
219 |
304 |
45.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45956.1 |
2 |
140 |
150 |
65.33 |
139 |
71 |
3e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G10380.1 |
81 |
219 |
304 |
45.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5436 |
Augustus |
mRNA |
49201 |
49720 |
. |
+ |
. |
ID=Dca45956.1;Parent=Dca45956 |
| scaffold5436 |
Augustus |
exon |
49201 |
49620 |
. |
+ |
. |
ID=Dca45956.1.exon1;Parent=Dca45956.1 |
| scaffold5436 |
Augustus |
exon |
49688 |
49720 |
. |
+ |
. |
ID=Dca45956.1.exon2;Parent=Dca45956.1 |
