Dca45978.1
Annotation
- 4-exons
- f-1
- sp|F6I741_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0203g00130#GO:0016020;GO:0003676;GO:0005337;GO:0004523#3F0P1C
- sp|B9H1Z9_POPTR#Equilibrative nucleoside transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817747#GO:0016020;GO:0005337#1F0P1C
- Repeat List (scaffold544)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45978.1 |
14 |
136 |
143 |
53.84 |
123 |
57 |
6e-37
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6I741_VITVI |
659 |
794 |
1063 |
12.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca45978.1 |
1 |
136 |
143 |
58.74 |
136 |
57 |
1e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G05120.1 |
1 |
149 |
418 |
35.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold544 |
Augustus |
mRNA |
91241 |
92400 |
. |
+ |
. |
ID=Dca45978.1;Parent=Dca45978 |
| scaffold544 |
Augustus |
exon |
91241 |
91282 |
. |
+ |
. |
ID=Dca45978.1.exon1;Parent=Dca45978.1 |
| scaffold544 |
Augustus |
exon |
91377 |
91442 |
. |
+ |
. |
ID=Dca45978.1.exon2;Parent=Dca45978.1 |
| scaffold544 |
Augustus |
exon |
91982 |
92137 |
. |
+ |
. |
ID=Dca45978.1.exon3;Parent=Dca45978.1 |
| scaffold544 |
Augustus |
exon |
92233 |
92400 |
. |
+ |
. |
ID=Dca45978.1.exon4;Parent=Dca45978.1 |
