Carnation DB

Dca45987.1

Annotation

6-exons
f-1
sp|F6H713_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0077g00740#GO:0016272;GO:0051082;GO:0006457#1F1P1C
sp|B9RZT0_RICCO#Prefoldin subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1000880#GO:0016272;GO:0051082;GO:0006457#1F1P1C
Repeat List (scaffold5441)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45987.1	1	189	194	79.38	189	82	2e-85
Target_name	Start	End	Length	Cov(%)
sp\|F6H713_VITVI	1	188	188	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45987.1	10	179	194	71.64	170	82	2e-80
Target_name	Start	End	Length	Cov(%)
AT5G49510.1	12	181	195	87.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5441	Augus-PASA	mRNA	10786	16932	.	-	.	ID=Dca45987.1;Parent=Dca45987
scaffold5441	Augus-PASA	exon	10786	10878	.	-	.	ID=Dca45987.1.exon1;Parent=Dca45987.1
scaffold5441	Augus-PASA	exon	12343	12444	.	-	.	ID=Dca45987.1.exon2;Parent=Dca45987.1
scaffold5441	Augus-PASA	exon	12532	12651	.	-	.	ID=Dca45987.1.exon3;Parent=Dca45987.1
scaffold5441	Augus-PASA	exon	13708	13779	.	-	.	ID=Dca45987.1.exon4;Parent=Dca45987.1
scaffold5441	Augus-PASA	exon	15597	15654	.	-	.	ID=Dca45987.1.exon5;Parent=Dca45987.1
scaffold5441	Augus-PASA	exon	16793	16932	.	-	.	ID=Dca45987.1.exon6;Parent=Dca45987.1