Carnation DB

Dca45997.1

Annotation

8-exons
f-1
sp|Q8GTR1_CITUN#Geranylgeranyl diphosphate synthase#Citrus unshiu (Satsuma mandarin) (Citrus nobilis var unshiu)#Name=Ggps#GO:0016740;GO:0008299#1F1P0C
Repeat List (scaffold5445)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45997.1	1	293	293	82.25	293	83	3e-137
Target_name	Start	End	Length	Cov(%)
sp\|Q8GTR1_CITUN	139	426	426	67.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca45997.1	1	293	293	74.06	293	75	6e-124
Target_name	Start	End	Length	Cov(%)
AT2G34630.2	135	422	422	68.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5445	Augustus	mRNA	988	5587	.	+	.	ID=Dca45997.1;Parent=Dca45997
scaffold5445	Augustus	exon	988	1122	.	+	.	ID=Dca45997.1.exon1;Parent=Dca45997.1
scaffold5445	Augustus	exon	1278	1364	.	+	.	ID=Dca45997.1.exon2;Parent=Dca45997.1
scaffold5445	Augustus	exon	2554	2625	.	+	.	ID=Dca45997.1.exon3;Parent=Dca45997.1
scaffold5445	Augustus	exon	2737	2822	.	+	.	ID=Dca45997.1.exon4;Parent=Dca45997.1
scaffold5445	Augustus	exon	3240	3372	.	+	.	ID=Dca45997.1.exon5;Parent=Dca45997.1
scaffold5445	Augustus	exon	4095	4184	.	+	.	ID=Dca45997.1.exon6;Parent=Dca45997.1
scaffold5445	Augustus	exon	4394	4492	.	+	.	ID=Dca45997.1.exon7;Parent=Dca45997.1
scaffold5445	Augustus	exon	5408	5587	.	+	.	ID=Dca45997.1.exon8;Parent=Dca45997.1