Carnation DB

Dca4600.1

Annotation

6-exons
f-1
sp|B9INH2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_736828#GO:0016021;GO:0005787;GO:0008233;GO:0006465#1F1P2C
AT3G05230.1 | Symbols: | Signal peptidase subunit | chr3:1492304-1493452 FORWARD LENGTH=167
Repeat List (scaffold11723)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4600.1	1	166	167	61.67	166	63	8e-59
Target_name	Start	End	Length	Cov(%)
sp\|B9INH2_POPTR	1	166	167	99.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4600.1	1	166	167	61.67	166	63	2e-59
Target_name	Start	End	Length	Cov(%)
AT3G05230.1	1	166	167	99.4

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11723	Augustus	mRNA	2392	6602	.	+	.	ID=Dca4600.1;Parent=Dca4600
scaffold11723	Augustus	exon	2392	2517	.	+	.	ID=Dca4600.1.exon1;Parent=Dca4600.1
scaffold11723	Augustus	exon	2607	2654	.	+	.	ID=Dca4600.1.exon2;Parent=Dca4600.1
scaffold11723	Augustus	exon	5545	5607	.	+	.	ID=Dca4600.1.exon3;Parent=Dca4600.1
scaffold11723	Augustus	exon	5731	5784	.	+	.	ID=Dca4600.1.exon4;Parent=Dca4600.1
scaffold11723	Augustus	exon	6292	6378	.	+	.	ID=Dca4600.1.exon5;Parent=Dca4600.1
scaffold11723	Augustus	exon	6477	6602	.	+	.	ID=Dca4600.1.exon6;Parent=Dca4600.1