Carnation DB

Dca46210.1

Annotation

7-exons
f-1
sp|B9NAP4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1118853#GO:0000166#1F0P0C
sp|B9RA16_RICCO#Polyadenylate-binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1502800#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold5496)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46210.1	20	202	446	32.73	183	75	5e-79
Target_name	Start	End	Length	Cov(%)
sp\|B9NAP4_POPTR	19	212	212	91.5

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46210.1	37	202	446	27.8	166	75	1e-65
Target_name	Start	End	Length	Cov(%)
AT5G65260.1	41	205	220	75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5496	Augustus	mRNA	28773	35043	.	+	.	ID=Dca46210.1;Parent=Dca46210
scaffold5496	Augustus	exon	28773	28883	.	+	.	ID=Dca46210.1.exon1;Parent=Dca46210.1
scaffold5496	Augustus	exon	28968	29070	.	+	.	ID=Dca46210.1.exon2;Parent=Dca46210.1
scaffold5496	Augustus	exon	30139	30209	.	+	.	ID=Dca46210.1.exon3;Parent=Dca46210.1
scaffold5496	Augustus	exon	31203	31394	.	+	.	ID=Dca46210.1.exon4;Parent=Dca46210.1
scaffold5496	Augustus	exon	31790	31917	.	+	.	ID=Dca46210.1.exon5;Parent=Dca46210.1
scaffold5496	Augustus	exon	34202	34288	.	+	.	ID=Dca46210.1.exon6;Parent=Dca46210.1
scaffold5496	Augustus	exon	34395	35043	.	+	.	ID=Dca46210.1.exon7;Parent=Dca46210.1