Carnation DB

Dca4634.1

Annotation

8-exons
f-1
sp|B9HMR7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766880#unknown#0F0P0C
Repeat List (scaffold1174)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4634.1	4	609	623	30.97	606	32	3e-45
Target_name	Start	End	Length	Cov(%)
sp\|B9HMR7_POPTR	18	527	566	90.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4634.1	410	457	623	4.49	48	56	1e-07
Target_name	Start	End	Length	Cov(%)
AT1G24160.1	361	410	540	9.25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1174	Augus-PASA	mRNA	53016	56864	.	-	.	ID=Dca4634.1;Parent=Dca4634
scaffold1174	Augus-PASA	exon	53016	53051	.	-	.	ID=Dca4634.1.exon1;Parent=Dca4634.1
scaffold1174	Augus-PASA	exon	53526	53627	.	-	.	ID=Dca4634.1.exon2;Parent=Dca4634.1
scaffold1174	Augus-PASA	exon	54119	54181	.	-	.	ID=Dca4634.1.exon3;Parent=Dca4634.1
scaffold1174	Augus-PASA	exon	54306	54396	.	-	.	ID=Dca4634.1.exon4;Parent=Dca4634.1
scaffold1174	Augus-PASA	exon	54891	54962	.	-	.	ID=Dca4634.1.exon5;Parent=Dca4634.1
scaffold1174	Augus-PASA	exon	55176	55243	.	-	.	ID=Dca4634.1.exon6;Parent=Dca4634.1
scaffold1174	Augustus	exon	55340	55783	.	-	.	ID=Dca4634.1.exon7;Parent=Dca4634.1
scaffold1174	Augustus	exon	55869	56864	.	-	.	ID=Dca4634.1.exon8;Parent=Dca4634.1