Carnation DB

Dca4648.1

Annotation

10-exons
f-1
sp|D7LBQ4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_903103#GO:0016779;GO:0009058#1F1P0C
AT2G38670.1 | Symbols: PECT1 | phosphorylethanolamine cytidylyltransferase 1 | chr2:16168979-16171680 FORWARD LENGTH=421
Repeat List (scaffold1175)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4648.1	53	400	476	62.81	348	86	3e-180
Target_name	Start	End	Length	Cov(%)
sp\|D7LBQ4_ARALL	50	398	421	82.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4648.1	53	400	476	62.6	348	86	0
Target_name	Start	End	Length	Cov(%)
AT2G38670.1	50	398	421	82.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1175	Augustus	mRNA	20759	24484	.	+	.	ID=Dca4648.1;Parent=Dca4648
scaffold1175	Augustus	exon	20759	21090	.	+	.	ID=Dca4648.1.exon1;Parent=Dca4648.1
scaffold1175	Augustus	exon	22129	22364	.	+	.	ID=Dca4648.1.exon2;Parent=Dca4648.1
scaffold1175	Augus-PASA	exon	22523	22704	.	+	.	ID=Dca4648.1.exon3;Parent=Dca4648.1
scaffold1175	Augus-PASA	exon	22852	22923	.	+	.	ID=Dca4648.1.exon4;Parent=Dca4648.1
scaffold1175	Augus-PASA	exon	23049	23116	.	+	.	ID=Dca4648.1.exon5;Parent=Dca4648.1
scaffold1175	Augus-PASA	exon	23216	23336	.	+	.	ID=Dca4648.1.exon6;Parent=Dca4648.1
scaffold1175	Augus-PASA	exon	23789	23854	.	+	.	ID=Dca4648.1.exon7;Parent=Dca4648.1
scaffold1175	Augustus	exon	23943	24109	.	+	.	ID=Dca4648.1.exon8;Parent=Dca4648.1
scaffold1175	Augustus	exon	24191	24281	.	+	.	ID=Dca4648.1.exon9;Parent=Dca4648.1
scaffold1175	Augustus	exon	24389	24484	.	+	.	ID=Dca4648.1.exon10;Parent=Dca4648.1