Carnation DB

Dca46511.1

Annotation

9-exons
f-1
sp|F6H0A8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g15710#GO:0016209;GO:0016491#2F0P0C
AT1G21350.3 | Symbols: | Thioredoxin superfamily protein | chr1:7477376-7479012 REVERSE LENGTH=252
Repeat List (scaffold556)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46511.1	2	242	243	73.25	241	74	2e-99
Target_name	Start	End	Length	Cov(%)
sp\|F6H0A8_VITVI	10	248	248	96.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46511.1	42	243	243	65.43	202	79	2e-93
Target_name	Start	End	Length	Cov(%)
AT1G21350.3	50	251	252	80.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold556	Augustus	mRNA	66623	69221	.	+	.	ID=Dca46511.1;Parent=Dca46511
scaffold556	Augustus	exon	66623	66832	.	+	.	ID=Dca46511.1.exon1;Parent=Dca46511.1
scaffold556	Augustus	exon	66933	66998	.	+	.	ID=Dca46511.1.exon2;Parent=Dca46511.1
scaffold556	Augustus	exon	67736	67816	.	+	.	ID=Dca46511.1.exon3;Parent=Dca46511.1
scaffold556	Augustus	exon	67898	67951	.	+	.	ID=Dca46511.1.exon4;Parent=Dca46511.1
scaffold556	Augustus	exon	68036	68104	.	+	.	ID=Dca46511.1.exon5;Parent=Dca46511.1
scaffold556	Augus-PASA	exon	68624	68686	.	+	.	ID=Dca46511.1.exon6;Parent=Dca46511.1
scaffold556	Augus-PASA	exon	68855	68937	.	+	.	ID=Dca46511.1.exon7;Parent=Dca46511.1
scaffold556	Augus-PASA	exon	69030	69095	.	+	.	ID=Dca46511.1.exon8;Parent=Dca46511.1
scaffold556	Augus-PASA	exon	69182	69221	.	+	.	ID=Dca46511.1.exon9;Parent=Dca46511.1