Carnation DB

Dca46529.1

Annotation

5-exons
f-1
sp|D7SJS7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g07110#unknown#0F0P0C
AT1G07080.1 | Symbols: | Thioredoxin superfamily protein | chr1:2170069-2171861 FORWARD LENGTH=265
Repeat List (scaffold5564)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46529.1	27	246	247	53.44	220	60	1e-70
Target_name	Start	End	Length	Cov(%)
sp\|D7SJS7_VITVI	28	248	259	85.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46529.1	30	225	247	48.98	196	62	3e-68
Target_name	Start	End	Length	Cov(%)
AT1G07080.1	38	235	265	74.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5564	Augus-PASA	mRNA	12609	14500	.	-	.	ID=Dca46529.1;Parent=Dca46529
scaffold5564	Augus-PASA	exon	12609	12797	.	-	.	ID=Dca46529.1.exon1;Parent=Dca46529.1
scaffold5564	Augus-PASA	exon	12887	12979	.	-	.	ID=Dca46529.1.exon2;Parent=Dca46529.1
scaffold5564	Augus-PASA	exon	13466	13606	.	-	.	ID=Dca46529.1.exon3;Parent=Dca46529.1
scaffold5564	Augus-PASA	exon	14064	14129	.	-	.	ID=Dca46529.1.exon4;Parent=Dca46529.1
scaffold5564	Augus-PASA	exon	14246	14500	.	-	.	ID=Dca46529.1.exon5;Parent=Dca46529.1