Carnation DB

Dca46539.1

Annotation

5-exons
f-1
sp|Q9M7J0_9ROSI#Retinoblastoma-related protein 1#Populus tremula x Populus tremuloides#Name=RB1#GO:0005634;GO:0051726#0F1P1C
Repeat List (scaffold5568)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46539.1	1	190	243	64.6	190	82	2e-89
Target_name	Start	End	Length	Cov(%)
sp\|Q9M7J0_9ROSI	571	762	1035	18.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca46539.1	1	190	243	62.13	190	79	6e-83
Target_name	Start	End	Length	Cov(%)
AT3G12280.1	546	736	1013	18.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5568	Augustus	mRNA	27110	29430	.	-	.	ID=Dca46539.1;Parent=Dca46539
scaffold5568	Augustus	exon	27110	27227	.	-	.	ID=Dca46539.1.exon1;Parent=Dca46539.1
scaffold5568	Augustus	exon	27772	27815	.	-	.	ID=Dca46539.1.exon2;Parent=Dca46539.1
scaffold5568	Augustus	exon	28157	28229	.	-	.	ID=Dca46539.1.exon3;Parent=Dca46539.1
scaffold5568	Augustus	exon	28348	28504	.	-	.	ID=Dca46539.1.exon4;Parent=Dca46539.1
scaffold5568	Augustus	exon	29091	29430	.	-	.	ID=Dca46539.1.exon5;Parent=Dca46539.1